Name	Short Description	Language
AutoCorrelation	Autocorrelation Function Estimate	R
BSpline	Time-warping using B-Splines (Bar-Joseph et al, 2017)	Python
BayesGenerate	Create sample data sets, with and without time warping (Bar-Joseph et al, 2017)	Python
CCM	Convergent Cross Mapping (Sugihara et al, 2012)	R
CrossCorrelation	Time-Series Cross-Correlation Values	R
CubicSpline	Cubic Spline Interpolation	R
CumulativeClassifier	Classify a set of samples by a set of features, at multiple timepoints	R
CumulativeTime	Choose the best features to use to classify a set of samples, at multiple timepoints.	R
Detrend	Detrend (Least-Squares Fit, Time Series Data)	R
DickeyFuller	Dickey-Fuller Test, Time Series Data (Said and Dickey, 1984)	R
LIMITS	LIMITS algorithm for inferring correlations across time-series (Fisher and Mehta, 2014)	R
PCMCI	PCMCI algorithm for time-series data (Runge et al, 2019)	Python
ReplicationRates	Bacterial Replication Rates (Brown et al, 2016)	Python
TimeSeries	Form a time-series dataset by merging static and dynamic properties	Python
TimeSeriesAlign	Time series data alignment, linear time warping (Bar-Joseph et al, 2017)	Python
TimeWarp	Perform time warping to align biological data sets to same internal clock	R

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